Neuroscience
Dezhe Z. Jin and Alexay A. Kozhevnikov,
"A compact statistical model of the song syntax in Bengalese finch",
PLoS Computational Biology, 7, e1001108 (2011).
(PDF)
Michael A. Long, Dezhe Z. Jin, and Michale S. Fee,
"Support for a synaptic chain model of sequence generation from intracellular recordings in the singing bird",
Nature, 468, 394 (2010).
(PDF,
SI)
Theresa M. Desrochers, Dezhe Z. Jin, Noah D. Goodman, and Ann M. Graybiel,
"Optimal habits can develop spontaneously through sensitivity to local cost",
Proceedings of National Academy of Science, 107, 20512 (2010).
(PDF,
SI)
Dezhe Z. Jin,
"Generating variable birdsong syllable sequences with branching chain networks
in avian premotor nucleus HVC",
Physical Review E, 80, 051902 (2009).
(PDF)
Dezhe Z. Jin, Naotaka Fujii, and Ann M. Graybiel,
"Neural representation of time in cortico-basal ganglia circuits",
Proceedings of National Academy of Science, 106, 19156 (2009).
(PDF,
SI)
Wonil Chang and Dezhe Z. Jin,
"Spike propagation in driven chain networks with dominant global inhibition",
Physical Review E, 79, 051917 (2009).
(PDF)
Dezhe Z. Jin,
"Decoding spatiotemporal spike sequences via the finite state automata dynamics of spiking neural networks",
New Journal of Physics, 10, 015010 (2008).
(PDF)
Joseph K. Jun and Dezhe Z. Jin,
"Development of neural circuitry for precise temporal sequences through spontaneous activity, axon remodeling, and synaptic
plasticity",
PLoS ONE, 2, e723 (2007).
(PDF).
Download the code related to the paper, written by Aaron Miller,
from the Model Database maintained at Yale University.
Dezhe Z. Jin, Fethi M. Ramazanoglu, and H. Sebastian Seung,
"Intrinsic bursting enhances the robustness of a neural network model of sequence generation by avian brain area HVC",
Journal of Computational Neuroscience, 23(3), 283-99 (2007).
(PDF)
Brandon J. Farley, Hongbo Yu, Dezhe Z. Jin, and Mriganka Sur, "Alteration of visual input results in a
coordinated reorganization of multiple visual cortex maps",
Journal of Neuroscience, 19, 10299-10310 (2007).
(PDF)
Dezhe Z. Jin, Valentin Dragoi, Mriganka Sur, and H. Sebastian Seung,
"The tilt aftereffect and adaptation-induced changes in orientation tuning in visual
cortex",
Journal of Neurophysiology, 94, 4038-4050 (2005). (PDF)
Terra D. Barnes, Yasuo Kubota, Dan Hu, Dezhe Z. Jin and Ann M. Graybiel,
"Activity of striatal neurons reflects dynamic encoding and recoding of procedural
memories",
Nature, 437, 1158-1161 (2005).
(PDF)
Hongbo Yu, Brandon J. Farley, Dezhe Z. Jin, and Mriganka Sur, "The coordinated
mapping of visual space and response features in visual cortex", Neuron, 47, 267
(2005). (PDF)
Dezhe Z. Jin, "Spiking neural network for recognizing spatiotemporal sequences of spikes", Physical Review E, 69, 021905 (2004). (PDF)
Dezhe Z. Jin, "Fast convergence of spike sequences to periodic patterns in recurrent networks", Physical Review Letters, 89, 208102 (2002). (PDF)
Dezhe Z. Jin and H. Sebastian Seung, "Fast computation with spikes in a recurrent neural network", Physical Review E, 65, 051922 (2002). (PDF)
Carson C. Chow, Dezhe Z. Jin, and Alessandro Treves, "Is the world full of circles?", Journal of Vision, 2, 571 (2002). (PDF)
Physics
Daniel H. E. Dubin and Dezhe Z. Jin, "Collisional diffusion in a 2-dimensional point vortex gas", Physics Letters A, 284, 112 (2001). (PDF)
Dezhe Z. Jin and Daniel H. E. Dubin, "Point vortex dynamics within a background vorticity patch", Physics of Fluids, 13, 677 (2001). (PDF)
Dezhe Z. Jin and Daniel H. E. Dubin, "Characteristics of two-dimensional turbulence that self-organizes into vortex crystals", Physical Review Letters, 84, 1443 (2000). (PDF)
Dezhe Z. Jin and Daniel H. E. Dubin, "Theory of vortex crystal formation in two-dimensional turbulence", Physics of Plasmas, 7, 1719 (2000). (PDF)
Dezhe Z. Jin and Daniel H. E. Dubin, "Regional maximum entropy theory of vortex crystal formation", Physical Review Letters, 80, 4434 (1998). (PDF)
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